## Abstract Oligonucleotides with a 3′−3′ inversion of polarity, containing an acridine moiety attached to the nucleotide base flanking the 3′−3′ phosphodiester bond, have been synthesised, characterised and used to form alternate‐strand triple helix complexes. These have been investigated by UV me
Synthesis and characterization of new 3′-3′ linked oligodeoxyribonucleotides for alternate strand triple helix formation
✍ Scribed by Lorenzo De Napoli; Giovanni Di Fabio; Anna Messere; Daniela Montesarchio; Domenica Musumeci; Gennaro Piccialli
- Book ID
- 104209524
- Publisher
- Elsevier Science
- Year
- 1999
- Tongue
- French
- Weight
- 903 KB
- Volume
- 55
- Category
- Article
- ISSN
- 0040-4020
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✦ Synopsis
Protected forms of 1,2,3-propanetriol and cis, cis-l,3,5-cyclohexanetriol were incorporated onto solid supports which were exploited in the solid phase synthesis of 3'-3' linked oligodeoxyribonucleotides (ODNs), involving only nucleoside 3'-phosphoramidites as building blocks. UV thermal denaturation analysis showed the ability of ODNs with this inversion of polarity motif to cooperatively hybridize with duplexes of the type 5'-(Pu)m(PY)n-3' in an alternate strand recognition approach.
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An improved protocol for the synthesis of oligonucleotides synthesized and the corresponding triplexes have been analyzed by thermal denaturation experiments and CD containing a 3ЈϪ3Ј phosphodiester linkage, for use in an alternate strand triple-helix formation approach, is reported. spectroscopy. T
The facile synthesis of 5'-5'-linked oligodeoxyribonucleotides (ODNs) with the potential for triple-helix formation is described. ODNs containing 5-trifluoroethoxycarbonyl-2'-deoxyuridine were treated with several diaminoalkanes to give ODNs carrying amino-linkers. After conversion of the amino-link