𝔖 Bobbio Scriptorium
✦   LIBER   ✦

Electrospray ionization mass spectrometry of synthetic oligonucleotides using 2-propanol and spermidine

✍ Scribed by Gianluca De Bellis; Giuliana Salani; Cristina Battaglia; Piergiorgio Pietta; Enrico Rosti; Pierluigi Mauri


Publisher
John Wiley and Sons
Year
2000
Tongue
English
Weight
120 KB
Volume
14
Category
Article
ISSN
0951-4198

No coin nor oath required. For personal study only.

✦ Synopsis


Oligonucleotides have become widely used tools in molecular biology and molecular diagnostics. Their parallel synthesis in large numbers and the increasing interest in microarray technology has raised the requirement for fast and informative analytical tools for their quality control. A direct injection electrospray ionization mass spectrometry (ESI-MS) technique based on the use of aqueous 2-propanol as running eluent, and spermidine (or triethylamine) as DNA modifiers, has been applied to analyze a large set of samples (about 200 synthetic oligonucleotides) ranging from 5 to 15 kDa (17-51mers) with good results in terms of sensitivity, suppression of sodium adduct formation, and speed of analysis. Copyright 2000 John Wiley & Sons, Ltd.


πŸ“œ SIMILAR VOLUMES


Negative Ionization Micro Electrospray M
✍ Michael J. Greig; Hans-J. Gaus; Richard H. Griffey πŸ“‚ Article πŸ“… 1996 πŸ› John Wiley and Sons 🌐 English βš– 443 KB πŸ‘ 2 views

The utility of negative ionization micro electrospray (microspray) mass spectrometry is demonstrated for detection of oligonucleotides and their noncovalent complexes. A simple microspray ionization source is fabricated from an outer stainless-steel needle and an inner fused-silica capillary. Under

Oligonucleotide sequencing using guanine
✍ Marzilli, Lisa A.; Barry, John P.; Sells, Todd; Law, Say-Jong; Vouros, Paul; Har πŸ“‚ Article πŸ“… 1999 πŸ› John Wiley and Sons 🌐 English βš– 113 KB πŸ‘ 1 views

This paper describes a novel method to map guanine bases in short oligonucleotides using a simple chemical modiÐcation reaction and subsequent analysis by electrospray ionization ion trap mass spectrometry (ITMS). In situ guanine-speciÐc methylation followed by gas-phase fragmentation permits the de

Observation of Non-covalent Interactions
✍ Gabriella PΓ³csfalvi; Giuseppe Di Landa; Pasquale Ferranti; Alberto Ritieni; Giac πŸ“‚ Article πŸ“… 1997 πŸ› John Wiley and Sons 🌐 English βš– 236 KB πŸ‘ 2 views

Electrospray ionization mass spectrometry has been used to study the possible non-covalent interaction between oligonucleotides and beauvericin (B) mycotoxin. Beauvericin-oligonucleotide adduct formation was observed even at low mycotoxin concentration (25 pmol/microL). Adducts were found with diffe

Sequence verification of oligodeoxynucle
✍ Ralf Lotz; Michael Gerster; Ernst Bayer πŸ“‚ Article πŸ“… 1998 πŸ› John Wiley and Sons 🌐 English βš– 383 KB πŸ‘ 1 views

The collision induced dissociations of oligodeoxynucleotides, 5' and 3'-terminal modified oligodeoxynucleotides and oligophosphorothioates, have been studied by using pneumatically assisted electrospray ionization mass spectrometry on a triple quadrupole instrument. Fragment ions were either produce

Electrospray ionization mass spectrometr
✍ Carlo Giorgio Zambonin; Francesco Palmisano πŸ“‚ Article πŸ“… 1999 πŸ› John Wiley and Sons 🌐 English βš– 79 KB πŸ‘ 2 views

The behaviour of 5-methyl-2'-deoxycytidine (m 5 dCyd, claimed to be a potential marker for leukaemia) during the electrospray process was studied. In particular, considerations concerning the effect of solution chemistry (e.g. analyte concentration, pH, etc.) on electrospray ionization mass spectra

Unravelling seemingly complex chemistry
✍ Ray Bakhtiar; Cornelis E. C. A. Hop πŸ“‚ Article πŸ“… 1999 πŸ› John Wiley and Sons 🌐 English βš– 195 KB πŸ‘ 2 views

Since its discovery, electrospray ionization mass spectrometry (ESI-MS) has provided valuable information on structurally specific biomolecular interactions, including DNA-drug, enzyme-inhibitor, DNAprotein and protein-protein interactions. In addition, this technique has emerged as a powerful tool