𝔖 Bobbio Scriptorium
✦   LIBER   ✦

Three-dimensional structural analysis of fibronectin heparin-binding domain mutations

✍ Scribed by Yvonne Kapila; Denise Doan; Elizabeth Tafolla; Robert Fletterick


Publisher
John Wiley and Sons
Year
2001
Tongue
English
Weight
454 KB
Volume
81
Category
Article
ISSN
0730-2312

No coin nor oath required. For personal study only.

✦ Synopsis


Using recombinant ®bronectin proteins containing the V region and two point mutations in the high-af®nity heparin-binding domain, we previously showed that these domains modulate tumor cell invasion as well as proteinase expression and apoptosis in human ®broblasts. Structurally, the wildtype counterparts to these two point mutations, together with four other discontinuous, positively charged residues, form a cationic cradle in domain III-13 of ®bronectin that binds heparin. We constructed a three-dimensional model of this cationic cradle and determined whether the two engineered point mutations in the heparin-binding domain would alter this cradle conformation, thus explaining the altered cell behavior. Our model of ®bronectin domain III-13 was generated from a template of the threedimensional structure of a homologous (25% identity) domain, III-3, from tenascin. The amino acid sequences of III-13 that differed from tenascin III-3 were replaced, and side chains for positively charged arginines 6 and 7 were substituted with uncharged threonines. The model revealed that the two mutated threonine residues were solvent accessible, readily accommodated as part of an antiparallel beta strand, and remained part of the three-dimensional cradle. These models suggest that the two point mutations in the heparin-binding domain of ®bronectin III-13 alter cell function probably through changes in charge and not through changes in the conformational structure of the cationic cradle.


📜 SIMILAR VOLUMES


Three-dimensional structural model of th
✍ Constance J. Jeffery; D.E. Koshland 📂 Article 📅 2008 🏛 Cold Spring Harbor Laboratory Press 🌐 English ⚖ 762 KB

## Abstract Computer‐based homology modeling techniques were used to construct a three‐dimensional model of the __Escherichia coli__ serine receptor ligand‐binding domain based on the crystal structure of the __Salmonella typhimurium__ aspartate receptor and the sequence homology between the two re

Construction and analysis of a detailed
✍ Jürgen Bajorath; Alejandro Aruffo 📂 Article 📅 1997 🏛 John Wiley and Sons 🌐 English ⚖ 415 KB 👁 2 views

The interaction between the human B cell receptor CD40 and its ligand on T cells is critical for B cell proliferation and the regulation of humoral immune responses. CD40 is a member of the tumor necrosis factor receptor (TNFR) family. We report here the construction and analysis of a detailed three