## Abstract MS2 RNA, which sediments at 27S in a neutral buffer, can be converted to a compact 57S conformation at pH 3.8. Requirements for this conversion, besides protonation, are small concentrations of Mg^++^ ions and a low ionic strength. On the other hand, after heating in the presence of EDT
Studies on the bacteriophage MS2. XXIII. Fixation of the MS2 RNA acid structure by formaldehyde
โ Scribed by H. Slegers; W. Fiers
- Publisher
- Wiley (John Wiley & Sons)
- Year
- 1973
- Tongue
- English
- Weight
- 468 KB
- Volume
- 12
- Category
- Article
- ISSN
- 0006-3525
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โฆ Synopsis
Abstract
When MS2 RNA is heated at low p^H^ in the presence of formaldehyde, a fastโsedimenting conformation is irreversibly formed. This species is homogeneous and stable at neutral p^H^. Its formation further requires Mg^++^ ions and low ionic strength. The most compact form sediments at 46S and is obtained after short reaction times at high temperature or after long reaction times at 35ยฐC. Melting curves suggest that the specific acid conformation is not destabilized by the formaldehyde addition reaction. The p^H^ at which this acid conformation is formed depends on the MgC1~2~ concentration. At 10^โ2^M MgCl~2~ the midpoint is p^H^ 5.3. Removal of more than half of the bound formaldehyde has no effect on the compactness of the molecule, although most of the original secondary structure has not yet reโformed.
๐ SIMILAR VOLUMES
## Abstract The molecular weight of native 26.6S MS2 RNA, of acidic 53.1S MS2 RNA and of formaldehydeโtreated 36.1S MS2 RNA was determined by lightโscattering studies. The three forms examined correspond to monomers. Also ฮฝv values were determined, and in conjunction with our previous estimates for
## Abstract Reaction of 27 SMS2 RNA with formaldehyde normally results in an unfolded, 13.4 S form. At acidic pH, however, and under the proper ionic conditions, a compact component sedimenting at 36โ40 S was obtained. The molecular weight of this species corresponds to a dinner. The formaldehyde c