## Abstract A genomeβbased measure for the distance between two populations is introduced. It fulfills the triangular inequality and can be easily computed, when the genetic sequences of a large number of individuals in two different populations are given. We use this distance for a study of mutati
Population structure increases the evolvability of genetic algorithms
β Scribed by Felix J. H. Hol; Xin Wang; Juan E. Keymer
- Publisher
- John Wiley and Sons
- Year
- 2012
- Tongue
- English
- Weight
- 483 KB
- Volume
- 17
- Category
- Article
- ISSN
- 1076-2787
No coin nor oath required. For personal study only.
β¦ Synopsis
Abstract
Populations are shaped by the spatial structure of their environment: space organizes interactions between individuals locally, and gives rise to a global population structure. Both local and global population structures can have a profound influence on the evolutionary dynamics of a population. To characterize this influence, we use genetic algorithms with several distinct contact structures to evolve cellular automata, which perform a density classification task. We find that local contact structures (modeled as graphs with various topologies) that limit the number of breeding partners show greater evolvability than wellβmixed populations. Furthermore, we show that the evolvability of wellβmixed populations is enhanced in a metapopulation setting of coupled subpopulations. Β© 2012 Wiley Periodicals, Inc. Complexity, 2012
π SIMILAR VOLUMES
Proteins exhibit a nonuniform distribution of structures. A number of models have been advanced to explain this observation by considering the distribution of designabilities, that is, the fraction of all sequences that could successfully fold into any particular structure. It has been postulated th
Models for the genetic evolution of natural populations have supplied the inspiration for the adaptive computer algorithms known as "genetic algorithms." In its original form, a genetic algorithm simulates the evolution of a haploid population: Genetic variation is produced by mutation at a number o
## Abstract An improved genetic algorithm (GA) is described that has been developed to increase the efficiency of finding the global minimum energy isomers for nanoalloy clusters. The GA is optimized for the example Pt~12~Pd~12~, with specific investigation of: the effect of biasing the initial pop