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Nucleotides. Part LXXIII : Oligoribonucleotide Synthesis with the (2-Cyano-1-phenylethoxy)carbonyl (2c1peoc) Group for the 5′-Hydroxy Protection

✍ Scribed by Ursula Münch; Wolfgang Pfleiderer


Publisher
John Wiley and Sons
Year
2003
Tongue
German
Weight
292 KB
Volume
86
Category
Article
ISSN
0018-019X

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✦ Synopsis


Abstract

The (2‐cyano‐1‐phenylethoxy)carbonyl (2c1peoc) group was developed as a new base‐labile protecting group for the 5′‐OH function in solid‐phase synthesis of oligoribonucleotides via the phosphoramidite approach. The half‐lives of its β‐elimination process by 0.1M DBU (1,8‐diazabicyclo[5.4.0]undec‐7‐ene) were determined to be 7–14 s by HPLC investigations. The 2′‐OH function was protected with the acid‐labile tetrahydro‐4‐methoxy‐2__H__‐pyran‐4‐yl (thmp) group, while the 2‐(4‐nitrophenyl)ethyl (npe) and 2‐(4‐nitrophenyl)ethoxycarbonyl (npeoc) groups were used for the protection of the base and phosphate moieties. The syntheses of the monomeric building blocks, both phosphoramidites and nucleoside‐functionalized supports, as well as the build‐up of oligoribonucleotides by means of this approach are described.


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Nucleotides. Part XLI. The 2-dansylethox
✍ Frank Bergmann; Wolfgang Pfleiderer 📂 Article 📅 1994 🏛 John Wiley and Sons 🌐 German ⚖ 896 KB

Use of the 2-dansylethoxycarbonyl (= 2-{[5-(dimethylan1ino)naphthalen-I-yl]sulfonyl}ethoxycarbonyl; Dnseoc) group as an intermediate 5'-OH protecting group in oligodeoxyribonucleotide synthesis using the automated phosphoramidite approach is described in a model study to an alternative strategy in R