Linkage analysis under the two-locus model and the admixture model was compared on pedigree data for a common disease simulated under a model of genetic heterogeneity. The ascertainment of families was designed so that the samples had a large proportion of families segregating for both disease loci.
Distribution of the admixture test for the detection of linkage under heterogeneity
โ Scribed by Julian J. Faraway
- Publisher
- John Wiley and Sons
- Year
- 1993
- Tongue
- English
- Weight
- 377 KB
- Volume
- 10
- Category
- Article
- ISSN
- 0741-0395
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โฆ Synopsis
Abstract
The admixture test for the detection of linkage under heterogeneity is considered. We show that the null distribution of this test statistic has half its weight concentrated on zero and the other half on a complicated distribution that can be approximated by max (X~1~, X ~2~ ) where X~1~ and X~2~ are independent ฯ variables. We also investigate the stability of the size of the test for small samples. The power of this test to detect linkage, when heterogeneity is present, can be substantially greater than the standard test that assumes homogeneity. Even when heterogeneity is not present, the test is only slightly less powerful than the homogeneous test. This would suggest the use of the admixture test in preference to the homogeneous test if the presence of heterogeneity is at all suspected. ยฉ 1993 WileyโLiss. Inc.
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