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A reinvestigation towards the conformation of methyl α-d-mannopyranosyl-(1 → 6)-α-d-mannopyranoside by a combined ROE and molecular dynamics analysis

✍ Scribed by Bertina A. Spronk; Alfonso Rivera-Sagredo; Johannis P. Kamerling; Johannes F.G. Vliegenthart

Book ID: 102990512
Publisher: Elsevier Science
Year: 1995
Tongue: English
Weight: 638 KB
Volume: 273
Category: Article
ISSN: 0008-6215
DOI: 10.1016/0008-6215(95)00061-w

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✦ Synopsis

Conformational analysis of a-D-Manp-(1 ~ 6)-a-D-Manpl-OMe, by a combination of extensive molecular dynamics calculations in water and ROE buildup series, afforded two main minima, namely, ~b/~/, = 95/-178 and q~/~b = 140/-185. Transitions between these minima are observed, which have not previously been demonstrated using other approaches. In contrast to literature data for the glycosidic linkage, describing equal populations of both the gg and the gt rotamers, it was found that the gg conformer is present to ca. 96%. The non-reducing mannosyl unit showed approximately a 1:1 ratio for the gg:gt equilibrium, in accordance with earlier reports.

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