3-Deazaguanine N7- and N9-(2′-Deoxy-β-D-ribofuranosides): Building Blocks for Solid-Phase Synthesis and Incorporation into Oligodeoxyribonucleotides
✍ Scribed by Frank Seela; Sigrid Lampe
- Publisher
- John Wiley and Sons
- Year
- 1991
- Tongue
- German
- Weight
- 663 KB
- Volume
- 74
- Category
- Article
- ISSN
- 0018-019X
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✦ Synopsis
Abstract
Oligonucleotides continuing 3‐deaza‐2′‐deoxyguanosine (I) or its N^7^‐regioisomer 2 were prepared by solid‐phase synthesis using P^111^ chemistry. Protection of ^1^ or ^2^ with N,N V‐dimethylformamide diethyl acetal followed by 4,4′‐dimethoxytritylation afforded imidazo[4,5‐c]pyridines 10b and 11b, respectively. The latter were converted into the 3′‐phosphonates 10__c__ or lie, respectively; the cyanoethyl N,N‐diisopropylphosphoramidite 10d was also prepared. The oligonucleotide building blocks were employed in automated solid‐phase synthesis. 1 he self‐complementary oligomers 13, 15, and 17 were prepared and characterized by enzymatic hydrolysis with snake‐venom phosphodiesterase followed by alkaline phosphatase. There CD spectra exhibited the general structure of a B‐DNA.
📜 SIMILAR VOLUMES
The syntheses of 7-deaza-N6-methyladenine N9-(2'-deoxy-~-o-ribofuranoside) (2) as well as o f 8-aza-7-deaza-N6-methyladenine N8-and N9-(2'-deoxyribofuranosides) (3 and 4, resp.) are described. A 4,4'-dimethoxytritylation followed by phosphitylation yielded the methyl phosphoramidites 12-14. They wer
A', is the symbol used for the 2'-deoxyadenosine moiety with the unusual Ns-instead of the usual fl-glycosidic linkage (purine numbering, see 1). The group Me,N-C(Me)= is represented by m,ma. The differences can also be attributed to the different attacking nucleophile (NH, us. OH-).
1-(2'-Deoxy-~-o-fhreo-pentofuranosyl)thymine ( = l-(2'-deoxy-~-~-xylofuranosyl)thymine; xT,; 2 ) was converted into its phosphonate 3b as well as its 2-cyanoethyl phosphoramidite 3c. Both compounds were used for solid-phase synthesis of d[(xT),,-TI (5), representing the first DNA fragment build up f