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The synthesis of allyl- and allyloxycarbonyl-protected RNA phosphoramidites. Useful reagents for solid-phase synthesis of RNAs with base-labile modifications

✍ Scribed by Felicia M. Bogdan; Christine S. Chow


Publisher
Elsevier Science
Year
1998
Tongue
French
Weight
249 KB
Volume
39
Category
Article
ISSN
0040-4039

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✦ Synopsis


The synthesis of atlyl-and allyloxycarbonyl (AOC)-protected RNA phosphoramidites is reporlexl. The use of allyl and AOC groups allows the chemistry of solid-phase RNA synthesis to be expanded to include base-labile modified nucleosides, such as acetylcytidine. The allyl-and AOCprotective chemistry can be further expanded for the construction of RNAs on solid supports and affinity columns.


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A new method for synthesis of 3'-end-phosphorylated DNA oligomers via the phosphoramidite method with allyl protection has been developed. This method is particularly useful for the preparation of derivatives with base-labile structures such as oligoDNA-OPO(OH)OCH2CH(R)Z, in which Z is an electron-w