Deletion and insertion mutations have been found to be a major component of the in vivo somatic mutation spectrum in the hypoxanthine phosphoribosyltransferase (hprt) gene of T-lymphocytes. In a population of 172 healthy people (average age, 34; mutant frequency, 10.3 x 10(-6)), deletion/insertion m
Splicing mutations at the HPRT locus in human T-lymphocytes in vivo
✍ Scribed by Anne-May Österholm; Sai-Mei Hou
- Publisher
- John Wiley and Sons
- Year
- 1998
- Tongue
- English
- Weight
- 183 KB
- Volume
- 32
- Category
- Article
- ISSN
- 0893-6692
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✦ Synopsis
We studied 58 splicing mutations originating in observed. The predicted change in three of the base vivo at the hypoxanthine guanine phosphoribosyl-substitutions would be a stop codon. The tandem transferase (HPRT) locus in T-cells of 30 nonsmoking mutation (CC r TT) occurred at position 550-551, males. A nonrandom distribution of skipped exons a possible hotspot for splicing mutations (five of nine was seen after cDNA sequence analysis, with 71% previously reported base substitutions at position involving exons 2-3 (15), 4 (11), and 8 (15). The 551, all C r T, resulted in abnormal splicing). Four mutations likely to have caused the aberrant splic-of the base substitutions were new HPRT mutations, ing were identified in 36 mutants by genomic se-two in splice sites (IVS7-3T r G and IVS8 / 3A r quencing. The most frequently observed mutations C) and two in the coding sequence (307A r T and were simple base substitutions ( 27) and small dele-594C r G). All the small deletions (ú1 bp) affected tions (7). Among the base substitutions, 23 occurred the acceptor sites. The only three identified mutain the splice consensus sequences, mainly at the tions related to skipping of exons 2 and 3 were highly conserved dinucleotides (21), and preferen-located within exon 3, suggesting a frequent tially in the acceptor sites (15). The remaining four involvement of unknown splicing elements distant base substitutions occurred in the coding sequence from these exons.
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