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Sequence-specific assignment of the backbone 1H- and 31P-nmr lines in a short DNA duplex with homo- and heteronuclear correlated spectroscopy

✍ Scribed by M. H. Frey; W. Leupin; O. W. Sørensen; W. A. Denny; R. R. Ernst; K. Wüthrich


Publisher
Wiley (John Wiley & Sons)
Year
1985
Tongue
English
Weight
534 KB
Volume
24
Category
Article
ISSN
0006-3525

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✦ Synopsis


We report the assignment of the backbone 'Hand 31P-nmr lines in the synthetic hexadeoxyribonucleotide pentaphosphate duplex d(GCATGC),, using double quantum filtered 'H-lH correlation spectroscopy, 'H observed IH3P heteronuclear correlation spectroscopy, and 31P relayed 'H-IH correlation spectroscopy. The strategy used enables one to make sequence-specific resonance assignments without reference to a known or assumed conformation of the DNA fragment.


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✍ Carine Tisne; Catherine Simenel; Edith Hantz; Francis Schaeffer; Muriel Delepier 📂 Article 📅 1996 🏛 John Wiley and Sons 🌐 English ⚖ 884 KB

Assignment of all 31P resonances of a 16 base-pair DNA duplex, Sd(CTGCTCACTTTCCAGG)Y Sd(CCTGGAAAGTGAGCAG)Y, related to the DNA KB site of the HIV-1 LTR, was determined by 2D heteronuclear inverse NMR spectroscopy (HSQC-TOCSY and heteronuclear COSY). 'J(H3'-P) coupling constants for most of the oligo