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New 2D graphical representation of DNA sequences

✍ Scribed by Bo Liao; Tian-Ming Wang

Publisher
John Wiley and Sons
Year
2004
Tongue
English
Weight
79 KB
Volume
25
Category
Article
ISSN
0192-8651

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✦ Synopsis

Abstract

We consider a 2D graphical representations of DNA sequences, which avoids loss of information associated with crossing and overlapping of the corresponding curve. We outline an approach, which is based on the construction of a three‐component vector whose components are the normalized leading eigenvalues of the L/L matrices associated with DNA. The examination of similarities/dissimilarities among the coding sequences of the first exon of β‐globin gene of different species illustrates the utility of the approach. Β© 2004 Wiley Periodicals, Inc. J Comput Chem 25: 1364–1368, 2004

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