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Modelling Neutral and Selective Evolution of Protein Folding

โœ Scribed by Lipman, D. J.; Wilbur, W. J.


Book ID
111928375
Publisher
The Royal Society
Year
1991
Tongue
English
Weight
972 KB
Volume
245
Category
Article
ISSN
0080-4649

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โœฆ Synopsis


We examine a model evolutionary space consisting of genotypes mapped to their corresponding phenotypes. This mapping is derived from a lattice model for proteins which, despite its highly idealized nature, has been shown to share general properties with real proteins. Large evolutionary networks are observed, with genotypes corresponding to non-lethal phenotypes linked by unit mutational steps. Neutral mutations are necessary for traversing the evolutionary networks, and even one neutral mutation in a genotype can change the phenotypes attainable by a unit mutational step.


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We stimulate the evolution of model protein sequences subject to mutations. A mutation is considered neutral if it conserves (1) the structure of the ground state, (2) its thermodynamic stability and (3) its kinetic accessibility. All other mutations are considered lethal and are rejected. We adopt