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Mathematical relations between codon bias indexes and their applications

✍ Scribed by Jun Wang; Yi Zhang

Book ID
106419511
Publisher
Springer
Year
2007
Tongue
English
Weight
412 KB
Volume
44
Category
Article
ISSN
0259-9791

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✍ Sharp, Paul M.; Li, Wen-Hsiung πŸ“‚ Article πŸ“… 1987 πŸ› Oxford University Press 🌐 English βš– 969 KB

A simple, effective measure of synonymous codon usage bias, the Codon Adaptation Index, is detailed. The index uses a reference set of highly expressed genes from a species to assess the relative merits of each codon, and a score for a gene is calculated from the frequency of use of all codons in th