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Hoxc8 early enhancer of the Indonesian coelacanth,Latimeria menadoensis

✍ Scribed by Shashikant, Cooduvalli ;Bolanowski, Stacey A. ;Danke, Joshua ;Amemiya, Chris T.


Book ID
102340421
Publisher
John Wiley and Sons
Year
2004
Tongue
English
Weight
184 KB
Volume
302B
Category
Article
ISSN
0022-104X

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✦ Synopsis


Abstract

Hoxc8 early enhancer controls the initiation and establishment phase of Hoxc8 expression in the mouse. Comparative studies indicate the presence of Hoxc8 early enhancer sequences in different vertebrate clades including mammals, birds and fish. Previous studies have shown differences between teleost and mammalian Hoxc8 early enhancers with respect to sequence and organization of protein binding elements. This raises the question of when the Hoxc8 early enhancer arose and how it has become modified in different vertebrate lineages. Here, we describe Hoxc8 early enhancer from the Indonesian coelacanth, Latimeria menadoensis. Coelacanths are the only extant lobefinned fish whose genome is tractable to genome analysis. The Latimeria Hoxc8 early enhancer sequence more closely resembles that of the mouse than that of Fugu or zebrafish. When assayed for enhancer activity by reporter gene analysis in transgenic mouse embryos, Latimeria Hoxc8 early enhancer directs expression to the posterior neural tube and mesoderm similar to that of the mouse enhancer. These observations support a close relationship between coelacanths and tetrapods and place the origin of a common Hoxc8 early enhancer sequence within the sarcopterygian lineage. The divergence of teleost (actinopterygii) Hoxc8 early enhancer may reflect a case of relaxed selection or other forms of instability induced by genome duplication events. J. Exp. Zool. (Mol. Dev. Evol.) 302B:000000, 2004. © 2004 Wiley‐Liss, Inc.


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Genome resource for the indonesian coela
✍ Danke, Joshua ;Miyake, Tsutomu ;Powers, Thomas ;Schein, Jacqueline ;Shin, Heesun 📂 Article 📅 2004 🏛 John Wiley and Sons 🌐 English ⚖ 206 KB

## Abstract We have generated a BAC library from the Indonesian coelacanth, __Latimeria menadoensis__. This library was generated using genomic DNA of nuclei isolated from heart tissue, and has an average insert size of 171 kb. There are a total of 288 384‐well microtiter dishes in the library (110