A simple and space-efficient fragment-ch
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B. Morgenstern
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Article
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2002
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Elsevier Science
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English
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In the segment-based approach to sequence alignment. nucleic acid, and protein sequence alignments are constructed from fragments, i.e., from pairs of ungapped segments of the input sequences. Given a set F of candidate fragments and a weighting function w : F + FL:, the score of an alignment is de