In the present study we characterize allelic variation of polymorphic __OLAβDQA1__ and __OLAβDQA2__ genes in sheep. To achieve this, PCR primers were designed to independently amplify the second exons of __OLAβDQA1__ and __OLAβDQA2__ genes. Single strand conformation polymorphism (SSCP) gel analyses
Evolution of the ovine MHC DQA region
β Scribed by Hickford J G H; Ridgway H J; Escayg A P
- Publisher
- John Wiley and Sons
- Year
- 2000
- Tongue
- English
- Weight
- 189 KB
- Volume
- 31
- Category
- Article
- ISSN
- 0268-9146
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β¦ Synopsis
Summary
Southern hybridisation was used to define an apparent gene duplication event at the ovine DQA2 locus. Approximately 500 sheep from five different breeds were genotyped at their DQA1 and DQA2 loci. A subset of these were selected for further characterisation. Southern hybridisation of __Taq__I digested DNA revealed no DQA1 region in some sheep. It was also noted in these DQA1 null animals the DQA2 specific probe hybridised to two bands. An __Eco__RVβRFLP designed to distinguish copy number confirmed this duplication of the DQA2 region. The results showed that the duplication was exclusively associated with the DQA1 null haplotype and occured only in alleles DQA2βF, βG, βI and βJ. Comparison with bovine MHC genes revealed that they also contained a DQA1 null haplotype and that this haplotype was associated with a putative DQA3 gene. The potential for an ovine DQA3 locus is discussed.
π SIMILAR VOLUMES
To study the class II genes of the major histocompatibility region of the sheep genome, human HLA class II genes corresponding to the known subregions in man (DR, DQ, DP, DO, and DZ) were used for Southern hybridization analysis of sheep DNA and to probe a sheep genomic library. Hybridizing bands we
The nucleotide sequences of one Ovar-DQB gene, excluding exon 1 and parts of the introns, and one Ovar-DRB pseudogene are presented. The structure of the Ovar-DQB gene is typical of a major histocompatibility complex (MHC) class II B gene and demonstrates considerable sequence similarity with that o