✦ LIBER ✦

Enlarged representative set of protein structures

✍ Scribed by Uwe Hobohm; Chris Sander

Book ID: 105356202
Publisher: Cold Spring Harbor Laboratory Press
Year: 2008
Tongue: English
Weight: 295 KB
Volume: 3
Category: Article
ISSN: 0961-8368
DOI: 10.1002/pro.5560030317

No coin nor oath required. For personal study only.

✦ Synopsis

Abstract

TO reduce redundancy in the Protein Data Bank of 3D protein structures, which is caused by many homologous proteins in the data bank, we have selected a representative set of structures. The selection algorithm was designed to (1) select as many nonhomologous structures as possible, and (2) to select structures of good quality. The representative set may reduce time and effort in statistical analyses.

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