## Abstract TO reduce redundancy in the Protein Data Bank of 3D protein structures, which is caused by many homologous proteins in the data bank, we have selected a representative set of structures. The selection algorithm was designed to (1) select as many nonhomologous structures as possible, and
Analysis of Protein Structural Motifs in Terms of Sets of Codes Representing Local Structures
โ Scribed by J. An; H. Wako; A. Sarai
- Book ID
- 110320492
- Publisher
- SP MAIK Nauka/Interperiodica
- Year
- 2001
- Tongue
- English
- Weight
- 85 KB
- Volume
- 35
- Category
- Article
- ISSN
- 0026-8933
No coin nor oath required. For personal study only.
๐ SIMILAR VOLUMES
We present a language for describing structural patterns of residues in protein structures and a method for the discovery of such patterns that recur in a set of protein structures. The patterns impose restrictions on the spatial position of each residue, their order along the amino acid chain, and
## Abstract The protein folding process is described by a cluster model based on the assumption that local structures or clusters are formed at an early stage in different regions of the polypeptide chain. Possible local structural elements in a globular protein are helices, bends, and hydrophobic
In this paper a generalized notion of an approximation space is considered. By an approximation space we mean an ordered pair \((U, \mathbb{C})\), where \(U\) is a finite nonempty set and \(\mathbb{C}\) is a covering of \(U\). According to connections between rough sets and concepts we define two ty