Electrophoresis of DNA in agarose gels: II. Effects of loading mass and electroendosmosis on electrophoretic mobilities
β Scribed by Paul H. Johnson; Michael J. Miller; Lawrence I. Grossman
- Publisher
- Elsevier Science
- Year
- 1980
- Tongue
- English
- Weight
- 514 KB
- Volume
- 102
- Category
- Article
- ISSN
- 0003-2697
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β¦ Synopsis
We have investigated several experimental factors which affect the accurate determination of electrophoretic mobilities of circular and linear DNAs in agarose gels. We demonstrate that: (1) The mobility of individual DNA species is affected by the total mass in the sample loaded. The increased mobility and band distortion observed become apparent when the DNA mass exceeds approximately 0.2 pg per 0.15 cm* of surface area in the loading well.
(2) The migration velocity of a given DNA species depends on the coefficient of electroendosmosis (-m,) of the agarose preparations used. In the range 0.081 s -m, I 0.441, the DNA migration velocity is proportional to (-m ,)-".S.
π SIMILAR VOLUMES
Electrophoretic mobilities of DNA molecules ranging in length from 200 to 48 502 base pairs (bp) were measured in agarose gels with concentrations T = 0.5% to 1.3% at electric fields from E = 0.71 to 5.0 V/cm. This broad data set determines a range of conditions over which the new interpolation equa
experimentally that during gel electrophoresis the mobility m and the dispersion coefficient D x [reflecting band broadening; G. W.
## Abstract The electrophoretic migration of rigid rodlike DNA structures with well defined topologies has been investigated in polyacrylamide (PA) hydrogels prepared by copolymerization of acrylamide and __N, N__β²βmethylenebisacrylamide. Previous studies have reported structural and dynamic charac