๐”– Bobbio Scriptorium
โœฆ   LIBER   โœฆ

Effective energy functions for protein structure prediction

โœ Scribed by Themis Lazaridis; Martin Karplus


Book ID
114314260
Publisher
Elsevier Science
Year
2000
Tongue
English
Weight
91 KB
Volume
10
Category
Article
ISSN
0959-440X

No coin nor oath required. For personal study only.


๐Ÿ“œ SIMILAR VOLUMES


Protein structure prediction using a com
โœ Dudek, Michael J.; Ramnarayan, K.; Ponder, Jay W. ๐Ÿ“‚ Article ๐Ÿ“… 1998 ๐Ÿ› John Wiley and Sons ๐ŸŒ English โš– 667 KB

A protein energy surface is constructed. Validation is through applications of global energy minimization to surface loops of protein crystal structures. For 9 of 10 predictions, the native backbone conformation is identified correctly. Electrostatic energy is modeled as a pairwise sum of interactio

Energy functions for protein design
โœ D Benjamin Gordon; Shannon A Marshall; Stephen L Mayot ๐Ÿ“‚ Article ๐Ÿ“… 1999 ๐Ÿ› Elsevier Science ๐ŸŒ English โš– 492 KB
Effective energy function for proteins i
โœ Themis Lazaridis; Martin Karplus ๐Ÿ“‚ Article ๐Ÿ“… 1999 ๐Ÿ› John Wiley and Sons ๐ŸŒ English โš– 251 KB ๐Ÿ‘ 2 views

A Gaussian solvent-exclusion model for the solvation free energy is developed. It is based on theoretical considerations and parametrized with experimental data. When combined with the CHARMM 19 polar hydrogen energy function, it provides an effective energy function (EEF1) for proteins in solution.