𝔖 Bobbio Scriptorium
✦   LIBER   ✦

Determinants of sweetness in proteins: a topological approach

✍ Scribed by Piero Andrea Temussi


Publisher
John Wiley and Sons
Year
2011
Tongue
English
Weight
759 KB
Volume
24
Category
Article
ISSN
0952-3499

No coin nor oath required. For personal study only.

✦ Synopsis


Sweet taste in mammals is accounted for by a single receptor that shares homology with a metabotropic glutamate receptor. Most sweeteners are small molecular weight molecules that interact with small cavities in the so‐called Venus Flytrap domains of the sweet receptor. The mechanism of action of larger molecules such as sweet proteins is, however, more difficult to interpret. The first and still the only general mechanism proposed for the action of sweet proteins, the β€œwedge model,” hypothesizes that proteins bind to an external binding site of the active conformation of the sweet receptor. Here, I have extended the concept that inspired the wedge model using a combination of structural analysis, bioinformatics tools, and a relatively large dataset of mutations of the two most extensively studied sweet proteins, monellin and brazzein. I show here that it is possible to single out, among the ensemble yielded by low‐resolution docking, a unique complex that satisfies simple topological constraints. These models of the complexes of monellin and brazzein are fully consistent with experimental evidence, thus providing predicting power for further validation of the wedge model. Copyright Β© 2011 John Wiley & Sons, Ltd.


πŸ“œ SIMILAR VOLUMES


Understanding topological symmetry: A he
✍ M. L. Contreras; J. Alvarez; D. Guajardo; R. Rozas πŸ“‚ Article πŸ“… 2007 πŸ› John Wiley and Sons 🌐 English βš– 259 KB

## Abstract An algorithm based on heuristic rules for topological symmetry perception of organic structures having heteroatoms, multiple bonds, and any kind of cycle, and configuration, is presented. This algorithm identifies topological symmetry planes and sets of equivalent atoms in the structure

Topological aspects of conformational tr
✍ S. Chiavarini; P. De Santis; S. Morosetti; A. Palleschi πŸ“‚ Article πŸ“… 1984 πŸ› Wiley (John Wiley & Sons) 🌐 English βš– 656 KB

The topological aspects of the conformational transformations in proteins are investigated using a new peptide-ribbon representation of the tertiary structure. The topological parameters evaluated on a set of 49 proteins show striking regularities that extend beyond the secondary structures actually