Ab initio geometry optimizations were performed on gaseous protonated glycine using the second-order Møller᎐Plesset perturbation theory with the 6-31G\*, 6-31G\*\*, 6-31qG\*\*, and 6-311qG\*\* basis sets. Eight energy minima and 12 saddle points in the low-energy region of the electronic potential e
Conformers of Gaseous Proline
✍ Scribed by Eszter Czinki; Attila G. Császár
- Publisher
- John Wiley and Sons
- Year
- 2003
- Tongue
- English
- Weight
- 240 KB
- Volume
- 9
- Category
- Article
- ISSN
- 0947-6539
No coin nor oath required. For personal study only.
✦ Synopsis
Abstract
Accurate geometries, relative energies, rotational and quartic centrifugal distortion constants, dipole moments, harmonic vibrational frequencies, and infrared intensities were determined from ab initio electronic structure calculations for eighteen conformers of the neutral form of the amino acid L‐proline. Only four conformers have notable population at low and moderate temperature. The second most stable conformer is only 2±2 kJ mol^−1^ above the global minimum, while the third and fourth conformers are nearly degenerate and have an excess energy of 7±2 kJ mol^−1^ relative to the global minimum. All four conformers have one hydrogen bond: N**⋅⋅⋅HO in the lower energy pair of conformers, and NH⋅⋅⋅**O in the higher energy pair of conformers. The conformer pairs differ only in their ring puckering. The relative energies of the conformers include corrections for valence electron correlation, extrapolated to the complete basis set limit, as well as core correlation and relativistic effects. Structural features of the pyrrolidine ring of proline are discussed by using the concept of pseudorotation. The accurate rotational and quartic centrifugal distortion constants as well as the vibrational frequencies and infrared intensities should aid identification and characterization of the conformers of L‐proline by rotational and vibrational spectroscopy, respectively. Bonding features of L‐proline, especially intramolecular hydrogen bonds, were investigated by the atoms‐in‐molecules (AIM) technique.
📜 SIMILAR VOLUMES
In the native state of proteins there is a marked tendency for an aromatic amino acid to precede a cis proline. There are also significant differences between the three aromatic amino acids with Tyr exhibiting a noticeably higher propensity than Phe or Trp to precede a cis proline residue. In order