## Abstract Conformational analysis of antiparallel double‐helical polynucleotides with Watson‐Crick base pairing was reduced to a four‐dimensional problem using original mathematical methods. In the four‐dimensional conformational space the family of structures, characterized by the base‐pair stac
Conformational analysis of double-helical polynucleotides
✍ Scribed by V. E. Khutorsky; V. I. Poltev
- Book ID
- 104579577
- Publisher
- John Wiley and Sons
- Year
- 1979
- Tongue
- English
- Weight
- 280 KB
- Volume
- 16
- Category
- Article
- ISSN
- 0020-7608
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✦ Synopsis
Abstract
The intramolecular interaction energy of the regular double‐helical polynucleotide as a function of variables that determine the mutual position of base pairs and sugar pucker was calculated using atom–atom potentials. The calculations showed the existence of two valley‐like regions with minimal values on the energetic surface. One of them corresponds to the A family of nucleic acids, the other to the B family. The points that correspond to the models constructed by means of x‐ray data are placed in a conformational space near the lines that describe the position of the bottom of the valleys.
📜 SIMILAR VOLUMES
## Abstract Conformational analysis of double‐stranded helical polynucleotides was carried out in terms of internal and external parameters, using semiempirical energy potential functions. The results obtained show that the structures proposed on the basis of the X‐ray analysis for A‐DNA and RNA's
## Abstract Double‐helical polynucleotide conformations, poly(dA)·poly(dT), poly(d(A‐T))·poly(d(T‐A))·poly(dG)·poly(dC), and poly(d(G‐C))·poly(d(C‐G)) are analyzed by the atom–atom potential method. The energy optimization is carried out in the space of eight independent geometric parameters using
## Abstract The adsorption of single‐stranded polynucleotides and double‐helical DNA on the dropping mercury electrode has been studied with the aid of Breyer's alternating current (a.c.) polarography. Our results indicate that all three constituents of polynucleotides (residues of bases, sugar, an