𝔖 Bobbio Scriptorium
✦   LIBER   ✦

Conformational analysis of dipeptide mimetics

✍ Scribed by Paul Gillespie; Janet Cicariello; Gary L. Olson


Book ID
102650681
Publisher
Wiley (John Wiley & Sons)
Year
1997
Tongue
English
Weight
523 KB
Volume
43
Category
Article
ISSN
0006-3525

No coin nor oath required. For personal study only.

✦ Synopsis


A compendium of compounds designed as dipeptide mimetics was collected from the literature. Conformational space available to these molecules was evaluated to obtain distance and torsion angle parameters to aid in selection of mimetics for specific target peptides or to explore diversity strategies. Conformations were searched using the RandomSearch algorithm in SYBYL. Data were collected for conformations of each molecule falling within 5 kcal/mol of the minimum. The distance between capping groups on the N-and C-termini of the molecules was measured as well as the pseudotorsion angle about a virtual bond between these two points. Molecules are classified based on the torsion angle space occupied and range of distances spanned by the resulting conformations. A large percentage of the dipeptide mimetics studied here have redundant conformational properties. The distribution of distances for all molecules covers an overall range of 3-15 A ˚, the majority falling between 5-8 A ˚. The angles for the majority of the molecules cover a wide range of torsional space with essentially no gaps in the values they can occupy, although these molecules can be subdivided by the average distance spanned by the allowed conformations. A smaller group of molecules have torsion angles that are restricted to a range of {60Њ about the cis position (0Њ). Representative examples of each group are shown. We conclude that despite the significant effort to devise unique molecular structures as dipeptide mimetics, there is a need for more conformationally restricted compounds to mimic specific peptide conformations, and to complement molecular diversity strategies.


πŸ“œ SIMILAR VOLUMES


Synthesis of constrained bicyclic dipept
✍ M.Arshad Siddiqui; Patrice PrΓ©ville; Micheline Tarazi; Scott E. Warder; Paul Eby πŸ“‚ Article πŸ“… 1997 πŸ› Elsevier Science 🌐 French βš– 198 KB

An efficient synthesis of constrained bicyclic peptidomimetics of (R)-Phe-Pro dipeptide is described. Such mimetics may provide an opportunity to develop inhibitors of thrombin possessing the desired pharmacological features.

Conformation of dipeptides
✍ Saul Lande πŸ“‚ Article πŸ“… 1969 πŸ› Wiley (John Wiley & Sons) 🌐 English βš– 467 KB

The amide bond in L,L-and L,m-chloropropionylalanine methyl ester is shown to be trans by molar polarization and infrared spectroscopy. In these dipeptide diastereoisomer analogues, therefore, differences in physical properties, i.e., melting points, crystalline forms, gas chromatographic mobilities

The design of polar Ξ²-turn dipeptide mim
✍ David C. Horwell; William Howson; Dorica Naylor; HenriΓ«tte M.G. Wilems πŸ“‚ Article πŸ“… 1995 πŸ› Elsevier Science 🌐 English βš– 248 KB