𝔖 Scriptorium
✦   LIBER   ✦

πŸ“

Big Data Analytics in Genomics

✍ Scribed by Ka-Chun Wong (eds.)


Publisher
Springer International Publishing
Year
2016
Tongue
English
Leaves
426
Edition
1
Category
Library

⬇  Acquire This Volume

No coin nor oath required. For personal study only.

✦ Synopsis


This contributed volume explores the emerging intersection between big data analytics and genomics. Recent sequencing technologies have enabled high-throughput sequencing data generation for genomics resulting in several international projects which have led to massive genomic data accumulation at an unprecedented pace. To reveal novel genomic insights from this data within a reasonable time frame, traditional data analysis methods may not be sufficient or scalable, forcing the need for big data analytics to be developed for genomics. The computational methods addressed in the book are intended to tackle crucial biological questions using big data, and are appropriate for either newcomers or veterans in the field.This volume offers thirteen peer-reviewed contributions, written by international leading experts from different regions, representing Argentina, Brazil, China, France, Germany, Hong Kong, India, Japan, Spain, and the USA. In particular, the book surveys three main areas: statistical analytics, computational analytics, and cancer genome analytics. Sample topics covered include: statistical methods for integrative analysis of genomic data, computation methods for protein function prediction, and perspectives on machine learning techniques in big data mining of cancer. Self-contained and suitable for graduate students, this book is also designed for bioinformaticians, computational biologists, and researchers in communities ranging from genomics, big data, molecular genetics, data mining, biostatistics, biomedical science, cancer research, medical research, and biology to machine learning and computer science. Readers will find this volume to be an essential read for appreciating the role of big data in genomics, making this an invaluable resource for stimulating further research on the topic.

✦ Table of Contents


Front Matter....Pages i-viii
Front Matter....Pages 1-1
Introduction to Statistical Methods for Integrative Data Analysis in Genome-Wide Association Studies....Pages 3-23
Robust Methods for Expression Quantitative Trait Loci Mapping....Pages 25-88
Causal Inference and Structure Learning of Genotype–Phenotype Networks Using Genetic Variation....Pages 89-143
Genomic Applications of the Neyman–Pearson Classification Paradigm....Pages 145-167
Front Matter....Pages 169-169
Improving Re-annotation of Annotated Eukaryotic Genomes....Pages 171-195
State-of-the-Art in Smith–Waterman Protein Database Search on HPC Platforms....Pages 197-223
A Survey of Computational Methods for Protein Function Prediction....Pages 225-298
Genome-Wide Mapping of Nucleosome Position and Histone Code Polymorphisms in Yeast....Pages 299-313
Front Matter....Pages 315-315
Perspectives of Machine Learning Techniques in Big Data Mining of Cancer....Pages 317-336
Mining Massive Genomic Data for Therapeutic Biomarker Discovery in Cancer: Resources, Tools, and Algorithms....Pages 337-355
NGS Analysis of Somatic Mutations in Cancer Genomes....Pages 357-372
OncoMiner: A Pipeline for Bioinformatics Analysis of Exonic Sequence Variants in Cancer....Pages 373-396
A Bioinformatics Approach for Understanding Genotype–Phenotype Correlation in Breast Cancer....Pages 397-428

✦ Subjects


Computational Biology/Bioinformatics;Data Mining and Knowledge Discovery;Statistics for Life Sciences, Medicine, Health Sciences;Genetics and Population Dynamics


πŸ“œ SIMILAR VOLUMES


Big Data Analytics in Genomics
✍ Ka-Chun Wong (eds.) πŸ“‚ Library πŸ“… 2016 πŸ› Springer 🌐 English

<div>This contributed volume explores the emerging intersection between big data analytics and genomics. Recent sequencing technologies have enabled high-throughput sequencing data generation for genomics resulting in several international projects which have led to massive genomic data accumulation

Big Data Analytics in Cybersecurity
✍ Deng, Julia; Savas, Onur πŸ“‚ Library πŸ“… 2017 πŸ› Taylor and Francis 🌐 English

"Big data is presenting challenges to cybersecurity. For an example, the Internet of Things (IoT) will reportedly soon generate a staggering 400 zettabytes (ZB) of data a year. Self-driving cars are predicted to churn out 4000 GB of data per hour of driving. Big data analytics, as an emerging analyt

Big Data Analytics in Healthcare
✍ Anand J. Kulkarni, Patrick Siarry, Pramod Kumar Singh, Ajith Abraham, Mengjie Zh πŸ“‚ Library πŸ“… 2020 πŸ› Springer International Publishing 🌐 English

<p><p>This book includes state-of-the-art discussions on various issues and aspects of the implementation, testing, validation, and application of big data in the context of healthcare. The concept of big data is revolutionary, both from a technological and societal well-being standpoint. This book

Advances in Big Data Analytics
✍ Hamid R. Arabnia; Fernando G. Tinetti πŸ“‚ Library πŸ“… 2018 πŸ› C. S. R. E. A. 🌐 English

Advances in Big Data Analyticsis a compendium of papers presented at ABDA '16, an international conference that serves researchers, scholars, professionals, students, and academicians.

Advances in Big Data Analytics
✍ Hamid R. Arabnia; Fernando G. Tinetti; Mary Q. Yang πŸ“‚ Library πŸ“… 2018 πŸ› C. S. R. E. A. 🌐 English

This volume contains the proceedings of the 2017 International Conference on Advances in Big Data Analytics (ABDA'17).

Data Science and Big Data Analytics: Dis
✍ EMC Education Services [EMC Education Services] πŸ“‚ Library πŸ“… 2015 πŸ› John Wiley & Sons 🌐 English

<span><span><p><em>Data Science and Big Data Analytics</em> is about harnessing the power of data for new insights. The book covers the breadth of activities and methods and tools that Data Scientists use. The content focuses on concepts, principles and practical applications that are applicable to