A unified symmetrical theory of DNA sequences has been established based on the basic symmetry of the DNA bases. It is shown that the symmetry of DNA sequences is inherently related to that of a cube and its inscribed regular tetrahedron. A DNA group is defined as a particular alternating group of o
Application of information theory to DNA sequence analysis: A review
✍ Scribed by Ramón Román-Roldán; Pedro Bernaola-Galván; JoséL Oliver
- Publisher
- Elsevier Science
- Year
- 1996
- Tongue
- English
- Weight
- 661 KB
- Volume
- 29
- Category
- Article
- ISSN
- 0031-3203
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## Abstract Graphical representation of a DNA sequence is a powerful tool for basic biological research. Based on the ordered dinucleotides, we propose a novel three dimensional (3D) graphical representation without circuit or degeneracy. Simultaneously, we derive the projection curve of the 3D gra
An information theory based multiple alignment ("Malign") method was used to align the DNA binding sequences of the OxyR and Fis proteins, whose sequence conservation is so spread out that it is difficult to identify the sites. In the algorithm described here, the information content of the sequence