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A predicted consensus structure for the C terminus of the beta and gamma chains of fibrinogen

✍ Scribed by Dietlind L. Gerloff; Fred E. Cohen; Steven A. Benner

Publisher: John Wiley and Sons
Year: 1997
Tongue: English
Weight: 432 KB
Volume: 27
Category: Article
ISSN: 0887-3585
DOI: 10.1002/(sici)1097-0134(199702)27:2<279::aid-prot13>3.0.co;2-j

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✦ Synopsis

A secondary structure has been predicted for the C termini of the fibrinogen b and g chains from an aligned set of homologous protein sequences using a transparent method that extracts conformational information from patters of variation and conservation, parsing strings, and patterns of amphiphilicity. The structure is modeled to form two domains, the first having a core parallel sheet flanked on one side by at least two helices and on the other by an antiparallel amphiphilic sheet, with an additional helix connecting the two sheets. The second domain is built entirely from b strands. Proteins 27:279-289

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