𝔖 Bobbio Scriptorium
✦   LIBER   ✦

A Finite Difference Method and Analysis for 2D Nonlinear Poisson–Boltzmann Equations

✍ Scribed by Zhilin Li; C. V. Pao; Zhonghua Qiao

Book ID
106421236
Publisher
Springer US
Year
2005
Tongue
English
Weight
330 KB
Volume
30
Category
Article
ISSN
0885-7474

No coin nor oath required. For personal study only.

📜 SIMILAR VOLUMES

Hybrid boundary element and finite diffe
Hybrid boundary element and finite difference method for solving the nonlinear Poisson–Boltzmann equation
✍ Alexander H. Boschitsch; Marcia O. Fenley 📂 Article 📅 2004 🏛 John Wiley and Sons 🌐 English ⚖ 513 KB

## Abstract A hybrid approach for solving the nonlinear Poisson–Boltzmann equation (PBE) is presented. Under this approach, the electrostatic potential is separated into (1) a linear component satisfying the linear PBE and solved using a fast boundary element method and (2) a correction term accoun

Solving the finite-difference, nonlinear
Solving the finite-difference, nonlinear, Poisson–Boltzmann equation under a linear approach
✍ Xiang Zhexin; Shi Yunyu; Xu Yinwu 📂 Article 📅 1995 🏛 John Wiley and Sons 🌐 English ⚖ 499 KB 👁 1 views

Electrostatic interactions are among the key factors in determining the structure and function of biomolecules. Simulating such interactions involves solving the Poisson equation and the Poisson-Boltzmann (P-B) equation in the molecular interior and exterior region, respectively. The P-B equation is

An improved pairwise decomposable finite
An improved pairwise decomposable finite-difference Poisson–Boltzmann method for computational protein design
✍ Christina L. Vizcarra; Naigong Zhang; Shannon A. Marshall; Ned S. Wingreen; Chen 📂 Article 📅 2008 🏛 John Wiley and Sons 🌐 English ⚖ 520 KB

## Abstract Our goal is to develop accurate electrostatic models that can be implemented in current computational protein design protocols. To this end, we improve upon a previously reported pairwise decomposable, finite difference Poisson–Boltzmann (FDPB) model for protein design (Marshall et al.,

pKa predictions with a coupled finite di
pKa predictions with a coupled finite difference Poisson–Boltzmann and Debye–Hückel method
✍ Jim Warwicker 📂 Article 📅 2011 🏛 John Wiley and Sons 🌐 English ⚖ 385 KB

## Abstract Modeling charge interactions is important for understanding many aspects of biological structure and function, and continuum methods such as Finite Difference Poisson–Boltzmann (FDPB) are commonly employed. Calculations of pH‐dependence have identified separate populations; surface grou