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A fast structural multiple alignment method for long RNA sequences

✍ Scribed by Yasuo Tabei; Hisanori Kiryu; Taishin Kin; Kiyoshi Asai

Book ID
115001379
Publisher
BioMed Central
Year
2008
Tongue
English
Weight
455 KB
Volume
9
Category
Article
ISSN
1471-2105

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Fast multiple alignment of ungapped DNA
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✍ Thomas D. Schneider; David N. Mastronarde πŸ“‚ Article πŸ“… 1996 πŸ› Elsevier Science 🌐 English βš– 651 KB

An information theory based multiple alignment ("Malign") method was used to align the DNA binding sequences of the OxyR and Fis proteins, whose sequence conservation is so spread out that it is difficult to identify the sites. In the algorithm described here, the information content of the sequence