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V-Phaser 2: variant inference for viral populations

โœ Scribed by Yang, Xiao; Charlebois, Patrick; Macalalad, Alex; Henn, Matthew R; Zody, Michael C

Book ID
121618053
Publisher
BioMed Central
Year
2013
Tongue
English
Weight
302 KB
Volume
14
Category
Article
ISSN
1471-2164

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Efficient algorithms for exact inference
Efficient algorithms for exact inference in 2 ร— 2 contingency tables
โœ V. Granville; E. Schifflers ๐Ÿ“‚ Article ๐Ÿ“… 1993 ๐Ÿ› Springer US ๐ŸŒ English โš– 290 KB

We propose a simple and robust algorithm for exact inference in 2 x 2 contingency tables. It is based on recursive relations allowing efficient computation of odds-ratio estimates, confidence limits and p-values for Fisher's test. A factor of 3 10 is gained in terms of computer time compared with th