Using Genome-Wide Protein Sequence Data to Predict Amino Acid Conservation
β Scribed by Peter Palenchar; Mathew Mount; Douglas Cusato; Jeffery Dougherty
- Publisher
- Springer
- Year
- 2008
- Tongue
- English
- Weight
- 179 KB
- Volume
- 27
- Category
- Article
- ISSN
- 1573-4943
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We showed previously that the use of arginine versus lysine residues in eukaryote proteins is correlated positively with local GC content of the genome within Ο·50 residues. Cumulative analyses show that the tendency for self-clustering (or repetitive use) generally is the case for all types of amino
## Abstract Using the pseudo amino acid (PseAA) composition to represent the sample of a protein can incorporate a considerable amount of sequence pattern information so as to improve the prediction quality for its structural or functional classification. However, how to optimally formulate the Pse