𝔖 Bobbio Scriptorium
✦   LIBER   ✦

Three Force Fields' Views of the 310 Helix

✍ Scribed by Patapati, Kalliopi K.; Glykos, Nicholas M.


Book ID
119209114
Publisher
Biophysical Society
Year
2011
Tongue
English
Weight
806 KB
Volume
101
Category
Article
ISSN
0006-3495

No coin nor oath required. For personal study only.


📜 SIMILAR VOLUMES


Origin of intrinsic 310-helix versus str
✍ Anna Jagielska; Jeffrey Skolnick 📂 Article 📅 2007 🏛 John Wiley and Sons 🌐 English ⚖ 208 KB

## Abstract Current all‐atom force fields often fail to recognize the native structure of a protein as the lowest free energy minimum. One possible cause could be the mathematical form of the potential based on the assumption that the conformation of a residue is independent of its neighbors. Here,

Protein folding simulation with solvent-
✍ Shoji Takada 📂 Article 📅 2000 🏛 John Wiley and Sons 🌐 English ⚖ 708 KB

We propose a coarse-grained model of proteins that take into account solvent effects and apply it for simulating folding of a three-helixbundle protein. The energy functional form, refined from our previous work (Takada et al., J Chem Phys 1999;110:11616 -11629), tries to closely imitate real physic