𝔖 Bobbio Scriptorium
✦   LIBER   ✦

Thermodynamic properties of MgSiO3perovskite derived from large scale molecular dynamics simulations

✍ Scribed by Björn Winkler; Martin T. Dove


Publisher
Springer-Verlag
Year
1992
Tongue
English
Weight
954 KB
Volume
18
Category
Article
ISSN
0342-1791

No coin nor oath required. For personal study only.

✦ Synopsis


A molecular dynamics simulation study of MgSiO3 has been performed using a large sample containing 4096 unit cells. Thermodynamic properties have been extracted using a semiclassical approximation to the correct quantum mechanical treatment, using the calculated density of states and the quantum harmonic formalism for thermodynamic functions. Simulations performed at different temperatures and volumes have given an estimate of the relative contributions due to thermal expansion (quasi-harmonic effects) and direct anharmonic interactions. Comparison of results for mean square atomic displacements with results on smaller samples have shown the limitations of smaller sample sizes.


📜 SIMILAR VOLUMES


Large-scale comparison of protein essent
✍ Aqeel Ahmed; Saskia Villinger; Holger Gohlke 📂 Article 📅 2010 🏛 John Wiley and Sons 🌐 English ⚖ 293 KB

## Abstract A large‐scale comparison of essential dynamics (ED) modes from molecular dynamic simulations and normal modes from coarse‐grained normal mode methods (CGNM) was performed on a dataset of 335 proteins. As CGNM methods, the elastic network model (ENM) and the rigid cluster normal mode ana

Improving efficiency of large time-scale
✍ Feenstra, K. Anton; Hess, Berk; Berendsen, Herman J. C. 📂 Article 📅 1999 🏛 John Wiley and Sons 🌐 English ⚖ 231 KB 👁 2 views

A systematic analysis is performed on the effectiveness of removing degrees of freedom from hydrogen atoms andror increasing hydrogen masses to increase the efficiency of molecular dynamics simulations of hydrogen-rich systems such as proteins in water. In proteins, high-frequency bond-angle vibrati