Absorption and circular dichroic (CD) spectra of the T -T \* transition near 200 nm are calculated for poly(Gly), poly(Ala), poly(Abu), and poly(Va1) in the Pp (parallel) and PA (antiparallel) pleated-sheet structures using the dipole interaction model and including interactions among all atoms; opt
Theoretical π-π* absorption, circular dichroic, and linear dichroic spectra of collagen triple helices
✍ Scribed by James W. Caldwell; Jon Applequist
- Publisher
- Wiley (John Wiley & Sons)
- Year
- 1984
- Tongue
- English
- Weight
- 741 KB
- Volume
- 23
- Category
- Article
- ISSN
- 0006-3525
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✦ Synopsis
Absorption, CD, and LD spectra of the r-n* transition near 200 nm are calculated for poly(G1y-X-Y) (X,Y = Gly, Ala, Pro) in four conformations proposed for collagenlike triple helices in the recent literature. A dipole interaction model is used with the same optical parameters as in previous studies of polypeptide spectra. The CD spectra are sensitive to backbone structure and amino acid composition, although the experimentally observed negative peak near 200 nm is a general feature of most the calculated spectra. Interchain interactions significantly affect the CD spectra in most cases. Calculations for (Gly-Pro-Ala)$ and (Gly-Ala-Pro), in the triple helical structure of Fraser, MacRae, and Suzuki "1979) J. Mol. Biol. 129, 463-4811 show absorption, CD, and LD spectra in fairly good agreement with experiment. The characteristics of the r-r* normal modes responsible for the calculated spectra are compared with those of the component bands resolved from the experimental spectra of collagen by Mandel and Holzwarth "1973) Biopolymers 12, 655-6741.
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## Abstract Absorption and CD spectra of the π‐π\* transition near 200 nm are calculated for helical (Pro)~__n__~ I and II (__n__ = 6, 10) using the dipole interaction model, including interactions among all atoms, with optical parameters obtained from previous studies of related molecules. Calcula
## Abstract Circular dichroic spectra and oscillator strengths of the π‐π transition near 190 nm are calculated for helical (Gly)~6~ and (Ala)~6~ at 30° intervals of the backbone torsion angles (ϕ,ψ) over the range ‐180° ≤ ϕ ≤ ‐60°, −60° ≤ ψ ≤ 180°, using the partially dispersive normal mode treatm
## SYNOPSIS Absorption and CD spectra of the P-P\* transition near 200 nm are calculated for helical (Pro),,, forms I and I1 with a variable proline ring conformation characterized by torsion angle X in the range -60' to 60". The spectra for poly ( P r o ) I are not sufficiently sensitive to X \*