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The X-ray crystal and molecular structure of 5′-bromo-5′-deoxythymidine

✍ Scribed by Jaroslaw Błaszczyk; Wiesław R. Majzner; Michał W. Wieczorek; Lucyna A. Wózniak


Publisher
John Wiley and Sons
Year
1998
Tongue
English
Weight
217 KB
Volume
9
Category
Article
ISSN
1042-7163

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✦ Synopsis


5Ј-Bromo-5Ј-deoxythymidine (1) crystallizes with four molecules in a monoclinic unit cell of space group C2. The ribose ring adopts an envelope conformation, transient between and E 0 (O4Ј-exo), 1 T 0 with the C1Ј atom being in the flap position. In the crystal lattice, the molecules are connected by intermolecular one-dimensional chains of hydrogen bondings from the hydroxyl hydrogen H3Ј(O3Ј) to the carbonyl oxygen O4. The differences in conformation and a hydrogen-bonding system of 1 with comparison to the structure of thymidine are observed.


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The reactions between the donors morpholine (1) and thiomorpholine (2) with I 2 in low polar solvents (C 6 H 6 , CHCl 3 , CH 2 Cl 2 ) and different donor/I 2 concentration ratios (1:1, 1:2, 1:3) yield solids of stoichiometry 1 • I 2 , , ,2•I 2 , and . Crystals suitable for ‫ם‬ ‫מ‬ ‫ם‬ ‫מ‬ ‫ם‬ ‫מ‬ 1H