𝔖 Bobbio Scriptorium
✦   LIBER   ✦

Tandemly Repeated Sequences in the Mitochondrial DNA Control Region and Phylogeography of the Pike-PerchesStizostedion

✍ Scribed by Joseph E. Faber; Carol A. Stepien


Publisher
Elsevier Science
Year
1998
Tongue
English
Weight
327 KB
Volume
10
Category
Article
ISSN
1055-7903

No coin nor oath required. For personal study only.

✦ Synopsis


DNA sequences from the mitochondrial DNA control region are used to test the phylogeographic relationships among the pike-perches, Stizostedion (Teleostei: Percidae) and to examine patterns of variation. Sequences reveal two types of variability: single nucleotide polymorphisms and 6 to 14 copies of 10-to 11-basepair tandemly repeated sequences. Numbers of copies of the tandem repeats are found to evolve too rapidly to detect phylogenetic signal at any taxonomic level, even among populations. Sequence similarities of the tandem repeats among Stizostedion and other percids suggest concerted evolutionary processes. Predicted folding of the tandem repeats and their proximity to termination-associated sequences indicate that secondary structure mediates slipped-strand mispairing among the d-loop, heavy, and light strands. Neighborjoining and maximum parsimony analyses of sequences indicate that the genus is divided into clades on the continents of North America and Eurasia. Calibrating genetic distances with divergence times supports the hypothesis that Stizostedion dispersed from Eurasia to North America across a North Pacific Beringial land bridge approximately 4 million years before present, near the beginning of the Pliocene Epoch. The North American S. vitreum and S. canadense appear separated by about 2.75 million years, and the Eurasian S. lucioperca and S. volgensis are diverged by about 1.8 million years, suggesting that speciation occurred during the late Pliocene Epoch. 1998 Academic Press


πŸ“œ SIMILAR VOLUMES


Repeated sequence homogenization between
✍ Luis CadahΓ­a; Wilhelm Pinsker; Juan JosΓ© Negro; Mihaela Pavlicev; Vicente Urios; πŸ“‚ Article πŸ“… 2009 πŸ› John Wiley and Sons 🌐 English βš– 228 KB

## Abstract In birds, the noncoding control region (CR) and its flanking genes are the only parts of the mitochondrial (mt) genome that have been modified by intragenomic rearrangements. In raptors, two noncoding regions are present: the CR has shifted to a new position with respect to the β€œancestr

Molecular Phylogeny for Marine Turtles B
✍ Peter H. Dutton; Scott K. Davis; Trina Guerra; Dave Owens πŸ“‚ Article πŸ“… 1996 πŸ› Elsevier Science 🌐 English βš– 440 KB

Marine turtles are divided into two families, the Dermochelyidae and the Cheloniidae. The majority of species are currently placed within the two tribes of the Cheloniidae, the Chelonini and the Carettini, but debate continues over generic and tribal affinities as well as species boundaries. We used

Evolution of the Mitochondrial DNA Contr
✍ Ettore Randi; Vittorio Lucchini; Alain Hennache; Rebecca T Kimball; Edward L Bra πŸ“‚ Article πŸ“… 2001 πŸ› Elsevier Science 🌐 English βš– 434 KB

The entire mitochondrial DNA control region (mtDNA CR) and cytochrome b (cyt b) genes were sequenced in 10 of the 11 extant species of gallopheasants (Lophura). The cyt b from L. diardi and L. ignita showed unusual leucine-coding codons at the expected terminal 3 end of the gene. Presence of conserv

Molecular Phylogenetic Relationships of
✍ Masayuki Sumida; Mitsuaki Ogata; Midori Nishioka πŸ“‚ Article πŸ“… 2000 πŸ› Elsevier Science 🌐 English βš– 89 KB

The evolutionary relationships of pond frogs distributed in the Far East and Europe were investigated by analyses of nucleotide sequences of mitochondrial 12S ribosomal RNA (12S rRNA) and cytochrome b (cyt b) genes. The nucleotide sequences of a 412-bp segment of the 12S rRNA gene and a 534-bp segme