A Monte Carlo procedure was used to determine the effect of excluded volume on the conformational dimensions of amyloaic chains. The excluded volume was introduced into the model by assuming that hard spheres, which cannot overlap each other, exist at the center of mees of each glucose unit in the c
Studies on the helical conformational of amylose and possible interconversions
β Scribed by P. R. Sundararajan; V. S. R. Rao
- Publisher
- Wiley (John Wiley & Sons)
- Year
- 1969
- Tongue
- English
- Weight
- 545 KB
- Volume
- 8
- Category
- Article
- ISSN
- 0006-3525
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β¦ Synopsis
The nonbonded energy (van der Waals) was computed for isolated helical amylose chains as a function of the dihedral angles (+,$), i.e., the relative orientations of the glucose residues in the polysaccharide chain. In conformity with x-ray data, different helical conformations have been proposed for different crystalline modifications of amylose. Right-handed helical conformations were preferred for 71.13, 6].33, and 42.65type helices from minimum energy considerations. The hydrogen bond search reveals the poesibility of formation of strong 0-H. . .0 type hydrogen bonds between contiguous residues in the polymer chain for 61.33 and 71. 13 helices. Smooth transition from a 71.18 to B 6 1 . 3 3 helix is possible with small changes in the values of (4,~) and without the loss of intramolecular hydrogen bonds, whereas all the intramolecular hydrogen bonds will be broken during the conversion from 61.33 to 4 2 . 6 5 helix.
π SIMILAR VOLUMES
The influence of steric effects on the helical geometry and the interconversion of type II to type I polyproline in water was examined by the synthesis and analysis of proline dimers and hexamers containing up to three (2S,5R)-5-tert-butylproline residues. In the dimers, the bulky 5-tert-butyl subst
## Abstract Potential energy calculations have been carried out on guanosine 5β²βmonophosphate and guanosine 3β²,5β²βdiphosphate by simultaneous variation of the rotation angles Ο and Ο to assess the influence of the base on the glycosyl and the sugarβphosphate backbone conformations and their possibl