Searching for long DNA strings is studied. A q-gram variation of the Boyer-Moore algorithm is considered. An alphabet transformation with precomputed tables is utilized to reduce the processing time. Experimental results show that the new algorithm is efficient in practice.
String-matching on ordered alphabets
โ Scribed by Maxime Crochemore
- Publisher
- Elsevier Science
- Year
- 1992
- Tongue
- English
- Weight
- 975 KB
- Volume
- 92
- Category
- Article
- ISSN
- 0304-3975
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