The solution electronic and molecular structure for the heme pocket of the cyanomet complex of the isolated alpha-chain of human adult hemoglobin (HbA) has been investigated by homonuclear two-dimensional 1H NMR in order to establish an assignment protocol for the dimeric chain that will guide simil
Solution 1H NMR study of the active site molecular structure and magnetic properties of the cyanomet complex of the isolated, tetrameric β-chain from human adult hemoglobin
✍ Scribed by Anh-Tuyet T. Tran; Urszula Kolczak; Gerd N. La Mar
- Publisher
- Elsevier Science
- Year
- 2004
- Tongue
- English
- Weight
- 426 KB
- Volume
- 1701
- Category
- Article
- ISSN
- 1570-9639
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✦ Synopsis
The solution molecular structure and the electronic and magnetic properties of the heme pocket of the cyanomet complex of the isolated h-chain of human adult hemoglobin, HbA, have been investigated by homonuclear 2D 1 H NMR in order to assess the extent of assignments allowed by 1 H NMR of a homo-tetrameric 65-kDa protein, to guide the future assignments of the heterotetrameric complex of HbA, and to compare the structure of the h-chain to the crystallographically characterized complexes that contains the h-chain. The target residues are those that exhibit significant (> | 0.2| ppm) dipolar shifts, as predicted by a ''preliminary'' set of magnetic axes determined from a small set of easily assigned active site residues. All 104 target residues (f 70% of total) were assigned by taking advantage of the temperature dependence predicted by the ''preliminary'' magnetic axes for the polypeptide backbone; they include all residues proposed to play a significant role in modulating the ligand affinity in the tetramer HbA. Left unassigned are the A-helix, the end of the G-helix and the beginning of the H-helix where dipolar shifts are less than | 0.2| ppm. These comprehensive assignments allow the determination of a robust set of orientation and anisotropies of the paramagnetic susceptibility tensor that leads to quantitative interpretation of the dipolar shifts of the h-chain in terms of the crystal coordinates of the h-subunit in ligated HbA which, in turn, confirms a largely conserved molecular structure of the isolated h-chain relative to that in the intact R-state HbA. The major magnetic axis, which is correlated with the tilt of the Fe-CN unit, is tilted f 10j from the heme normal so that the Fe-CN unit is tilted toward the h-meso-H in a fashion remarkably similar to the Fe-CO tilt in the h-subunit of HbCO. It is concluded that a set of ''preliminary'' magnetic axes and the use of variable temperature 2D NMR spectra are crucial to effective assignments in the tetrameric cyanomet h-chain and that this approach should be similarly effective in HbA.
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