Molecular electrostatic potential MEP values on the van der Waals surfaces of 20 amino acids were computed using experimental geometries and four Ε½ . Ε½ . different types of charge distributions, that is, i potential-derived CHelpG charges Ε½ . obtained from ab initio SCF calculations using the 3-21G
Site charge models for molecular electrostatic potentials of cycloalkanes and tetrahedrane
β Scribed by Williams, Donald E.; Abraha, Aron
- Publisher
- John Wiley and Sons
- Year
- 1999
- Tongue
- English
- Weight
- 158 KB
- Volume
- 20
- Category
- Article
- ISSN
- 0192-8651
No coin nor oath required. For personal study only.
β¦ Synopsis
The molecular structures of cycloalkanes from cyclopropane to . cyclodecane and tetrahedrane were optimized at the HartreeαFockr6α31G** Ε½ . level and their molecular electric potentials MEPs were calculated using a geodesic grid. The MEPs were fitted using net atomic charges and several site charge models. The net atomic charge model gave very poor fits to the MEPs in every case. A model with additional methylene bisector charge sites, similar to one successfully used previously for linear alkanes, greatly improved the fits to the MEPs of these cycloalkanes. The MEPs of the highly strained molecules cyclopropane and tetrahedrane were further studied using ring center and displaced bond charge sites. The fitting of the MEP of cyclopropane was consistent with a banana bond model with asymmetrically displaced electron density in the C-C bonds.
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