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Rational engineering of the TOL meta-cleavage pathway

✍ Scribed by Rose Sheridan; Graham A. Jackson; Lucy Regan; John Ward; Peter Dunnill


Publisher
John Wiley and Sons
Year
1998
Tongue
English
Weight
238 KB
Volume
58
Category
Article
ISSN
0006-3592

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✦ Synopsis


The meta-cleavage pathway of Pseudomonas putida mt-2 was simulated using a biochemical systems simulation developed by Regan (1996). A non-competitive inhibition term for catechol-2,3-dioxygenase (C23O) by 2-OH-pent-2,4-dienoate (K i = 150 µM) was incorporated into the model. The simulation predicted steady state accumulation levels in the µM range for metabolites pre-meta-cleavage, and in the mM range for metabolites post-meta-cleavage. The logarithmic gains L[V - i , X j ] and L[X - i , X j ] clearly indicated that the pathway was most sensitive to the concentration of the starting substrate, benzoate, and the first enzyme of the pathway, toluate-1,2-dioxygenase (TO). The simulation was validated experimentally; it was found that the amplification of TO increased the steady state flux from 0.024 to 0.091 (mmol/g cell dwt)/h. This resulted in an increased accumulation of a number of the pathway metabolites (intraand extracellularly), especially cis-diol, 4-OH-2oxovalerate, and 4-oxalocrotonate. Metabolic control analysis indicated that C23O was, in fact, the major controling enzymic step of the pathway with a scaled control coefficient of 0.83. The amplification of TO resulted in a shift of some of the control away from C23O. Catechol-2,3-dioxygenase, however, remained as the major controling element of the pathway.


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