Rational engineering of the TOL meta-cleavage pathway
✍ Scribed by Rose Sheridan; Graham A. Jackson; Lucy Regan; John Ward; Peter Dunnill
- Publisher
- John Wiley and Sons
- Year
- 1998
- Tongue
- English
- Weight
- 238 KB
- Volume
- 58
- Category
- Article
- ISSN
- 0006-3592
No coin nor oath required. For personal study only.
✦ Synopsis
The meta-cleavage pathway of Pseudomonas putida mt-2 was simulated using a biochemical systems simulation developed by Regan (1996). A non-competitive inhibition term for catechol-2,3-dioxygenase (C23O) by 2-OH-pent-2,4-dienoate (K i = 150 µM) was incorporated into the model. The simulation predicted steady state accumulation levels in the µM range for metabolites pre-meta-cleavage, and in the mM range for metabolites post-meta-cleavage. The logarithmic gains L[V - i , X j ] and L[X - i , X j ] clearly indicated that the pathway was most sensitive to the concentration of the starting substrate, benzoate, and the first enzyme of the pathway, toluate-1,2-dioxygenase (TO). The simulation was validated experimentally; it was found that the amplification of TO increased the steady state flux from 0.024 to 0.091 (mmol/g cell dwt)/h. This resulted in an increased accumulation of a number of the pathway metabolites (intraand extracellularly), especially cis-diol, 4-OH-2oxovalerate, and 4-oxalocrotonate. Metabolic control analysis indicated that C23O was, in fact, the major controling enzymic step of the pathway with a scaled control coefficient of 0.83. The amplification of TO resulted in a shift of some of the control away from C23O. Catechol-2,3-dioxygenase, however, remained as the major controling element of the pathway.
📜 SIMILAR VOLUMES
Normative deliberative theory has contributed much to an understanding of ideal procedural standards, but there is considerable uncertainty regarding the appropriate nature of desired deliberative outcomes. In this paper we identify two inter‐related concepts of meta‐consensus and inter‐subjective r
## Abstract Collagens are attractive proteins as materials for tissue engineering. Over the last decade, significant progress has been made in developing technologies for large‐scale production of native‐like human recombinant collagens. Yet, the rational design of customized collagen‐like proteins