Molecular dynamics simulations of -hairpin folding have been carried out with a solvent-referenced potential at 274 K. The model peptide V 4 D PGV 4 formed stable -hairpin conformations and the -hairpin ratio calculated by the DSSP algorithm was about 56% in the 50-ns simulation. Folding into -h
✦ LIBER ✦
Protein Folding Pathways and Kinetics: Molecular Dynamics Simulations of β-Strand Motifs
✍ Scribed by Jang, Hyunbum; Hall, Carol K.; Zhou, Yaoqi
- Book ID
- 118514718
- Publisher
- Biophysical Society
- Year
- 2002
- Tongue
- English
- Weight
- 820 KB
- Volume
- 83
- Category
- Article
- ISSN
- 0006-3495
No coin nor oath required. For personal study only.
📜 SIMILAR VOLUMES
Molecular dynamics simulations of β-hair
✍
Hongwu Wang; Judith Varady; Lily Ng; Shen-Shu Sung
📂
Article
📅
1999
🏛
John Wiley and Sons
🌐
English
⚖ 252 KB
👁 1 views
Assembly and Kinetic Folding Pathways of
✍
Jang, Hyunbum; Hall, Carol K.; Zhou, Yaoqi
📂
Article
📅
2004
🏛
Biophysical Society
🌐
English
⚖ 544 KB
Computer simulations of protein folding
✍
Philippe Ferrara; Joannis Apostolakis; Amedeo Caflisch
📂
Article
📅
2000
🏛
John Wiley and Sons
🌐
English
⚖ 362 KB
👁 3 views
We have performed 128 folding and 45 unfolding molecular dynamics runs of chymotrypsin inhibitor 2 (CI2) with an implicit solvation model for a total simulation time of 0.4 microseconds. Folding requires that the three-dimensional structure of the native state is known. It was simulated at 300 K by
Describing Protein Folding Kinetics by M
✍
Swope, William C.; Pitera, Jed W.; Suits, Frank; Pitman, Mike; Eleftheriou, Mari
📂
Article
📅
2004
🏛
American Chemical Society
🌐
English
⚖ 267 KB
ChemInform Abstract: Molecular Dynamics
✍
Valerie Daggett
📂
Article
📅
2010
🏛
John Wiley and Sons
⚖ 24 KB
👁 2 views
All-Atom Molecular Dynamics Simulations
✍
Kim, Joohyun; Keiderling, Timothy A.
📂
Article
📅
2010
🏛
American Chemical Society
🌐
English
⚖ 559 KB