<p><P>Plant genomics is a growing and constantly evolving field of study, one which has gained much ground in past years through the development of advanced research and data management tools. In Plant Genomics: Methods and Protocols, expert researchers explore the current issues and methodologies o
Plant Genome Editing with CRISPR Systems: Methods and Protocols
โ Scribed by Yiping Qi
- Publisher
- Springer New York;Humana Press
- Year
- 2019
- Tongue
- English
- Leaves
- 359
- Series
- Methods in Molecular Biology 1917
- Edition
- 1st ed.
- Category
- Library
No coin nor oath required. For personal study only.
โฆ Synopsis
This volume provides readers with wide-ranging coverage of CRISPR systems and their applications in various plant species. The chapters in this book discuss topics such as plant DNA repair and genome editing; analysis of CRISPR-induced mutations; multiplexed CRISPR/Cas9 systems; CRISPR-Cas12a (Cpf1) editing systems; and non-agrobacterium based CRISPR delivery systems. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls.
Comprehensive and thorough, Plant Genome Editing with CRISPR Systems: Methods and Protocols is a valuable resource for any researcher interested in learning about and using CRISPR systems in plants.
โฆ Table of Contents
Front Matter ....Pages i-xv
Front Matter ....Pages 1-1
Plant DNA Repair Pathways and Their Applications in Genome Engineering (Qiudeng Que, Zhongying Chen, Tim Kelliher, David Skibbe, Shujie Dong, Mary-Dell Chilton)....Pages 3-24
Front Matter ....Pages 25-25
Rapid Screening of CRISPR/Cas9-Induced Mutants Using the ACT-PCR Method (Chun Wang, Kejian Wang)....Pages 27-32
Decoding Sanger Sequencing Chromatograms from CRISPR-Induced Mutations (Xianrong Xie, Xingliang Ma, Yao-Guang Liu)....Pages 33-43
Front Matter ....Pages 45-45
Creating Large Chromosomal Deletions in Rice Using CRISPR/Cas9 (Riqing Li, Si Nian Char, Bing Yang)....Pages 47-61
A Multiplexed CRISPR/Cas9 Editing System Based on the Endogenous tRNA Processing (Kabin Xie, Yinong Yang)....Pages 63-73
A Single Transcript CRISPR-Cas9 System for Multiplex Genome Editing in Plants (Xu Tang, Zhaohui Zhong, Qiurong Ren, Binglin Liu, Yong Zhang)....Pages 75-82
CRISPR-Act2.0: An Improved Multiplexed System for Plant Transcriptional Activation (Aimee Malzahn, Yong Zhang, Yiping Qi)....Pages 83-93
Front Matter ....Pages 95-95
Generating Photoperiod-Sensitive Genic Male Sterile Rice Lines with CRISPR/Cas9 (Weihang Gu, Dabing Zhang, Yiping Qi, Zheng Yuan)....Pages 97-107
Knocking Out MicroRNA Genes in Rice with CRISPR-Cas9 (Jianping Zhou, Zhaohui Zhong, Hongqiao Chen, Qian Li, Xuelian Zheng, Yiping Qi et al.)....Pages 109-119
An Agrobacterium-Mediated CRISPR/Cas9 Platform for Genome Editing in Maize (Keunsub Lee, Huilan Zhu, Bing Yang, Kan Wang)....Pages 121-143
Front Matter ....Pages 145-145
Fluorescence Marker-Assisted Isolation of Cas9-Free and CRISPR-Edited Arabidopsis Plants (Hanchuanzhi Yu, Yunde Zhao)....Pages 147-154
Creating Targeted Gene Knockouts in Brassica oleracea Using CRISPR/Cas9 (Tom Lawrenson, Penny Hundleby, Wendy Harwood)....Pages 155-170
Application of CRISPR/Cas9-Mediated Gene Editing in Tomato (Nathan T. Reem, Joyce Van Eck)....Pages 171-182
Genome Editing in Potato with CRISPR/Cas9 (Satya Swathi Nadakuduti, Colby G. Starker, Daniel F. Voytas, C. Robin Buell, David S. Douches)....Pages 183-201
Visual Assay for Gene Editing Using a CRISPR/Cas9 System in Carrot Cells (Magdalena Klimek-Chodacka, Tomasz Oleszkiewicz, Rafal Baranski)....Pages 203-215
Genome Editing in Soybean with CRISPR/Cas9 (Junqi Liu, Samatha Gunapati, Nicole T. Mihelich, Adrian O. Stec, Jean-Michel Michno, Robert M. Stupar)....Pages 217-234
Genome Editing in Citrus Tree with CRISPR/Cas9 (Hongge Jia, Xiuping Zou, Vladimir Orbovic, Nian Wang)....Pages 235-241
Front Matter ....Pages 243-243
Plant Gene Knockout and Knockdown by CRISPR-Cpf1 (Cas12a) Systems (Yingxiao Zhang, Yong Zhang, Yiping Qi)....Pages 245-256
Editing a Stomatal Developmental Gene in Rice with CRISPR/Cpf1 (Xiaojia Yin, Abhishek Anand, Paul Quick, Anindya Bandyopadhyay)....Pages 257-268
Targeted Mutagenesis Using FnCpf1 in Tobacco (Akira Endo, Seiichi Toki)....Pages 269-281
Front Matter ....Pages 283-283
Gene Replacement by Intron Targeting with CRISPR-Cas9 (Jun Li, Xiangbing Meng, Jiayang Li, Caixia Gao)....Pages 285-296
Targeted Base Editing with CRISPR-Deaminase in Tomato (Zenpei Shimatani, Tohru Ariizumi, Ushio Fujikura, Akihiko Kondo, Hiroshi Ezura, Keiji Nishida)....Pages 297-307
Front Matter ....Pages 309-309
Virus-Mediated Genome Editing in Plants Using the CRISPR/Cas9 System (Ahmed Mahas, Zahir Ali, Manal Tashkandi, Magdy M. Mahfouz)....Pages 311-326
Biolistic Delivery of CRISPR/Cas9 with Ribonucleoprotein Complex in Wheat (Zhen Liang, Kunling Chen, Caixia Gao)....Pages 327-335
DNA-Free Genome Editing via Ribonucleoprotein (RNP) Delivery of CRISPR/Cas in Lettuce (Jongjin Park, Sunmee Choi, Slki Park, Jiyoung Yoon, Aiden Y. Park, Sunghwa Choe)....Pages 337-354
An Automated Protoplast Transformation System (Scott C. Lenaghan, C. Neal Stewart Jr.)....Pages 355-363
Back Matter ....Pages 365-367
โฆ Subjects
Life Sciences; Plant Sciences; Plant Genetics and Genomics
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