## Abstract The oxygen of a peptide bond has two lone pairs of electrons. One of these lone pairs is poised to interact with the electron‐deficient carbon of the subsequent peptide bond in the chain. Any partial covalency that results from this n→π\* interaction should induce pyramidalization of th
Phosphorylation stabilizes the N-termini of α-helices
✍ Scribed by Jason L. Smart; J. Andrew McCammon
- Publisher
- Wiley (John Wiley & Sons)
- Year
- 1999
- Tongue
- English
- Weight
- 297 KB
- Volume
- 49
- Category
- Article
- ISSN
- 0006-3525
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✦ Synopsis
The role of phosphorylation in stabilizing the N-termini of ␣-helices is examined using computer simulations of model peptides. The models comprise either a phosphorylated or unphosphorylated serine at the helix N-terminus, followed by nine alanines. Monte Carlo/stochastic Dynamics simulations were performed on the model helices. The simulations revealed a distinct stabilization of the helical conformation at the N-terminus after phosphorylation. The stabilization was attributable to favorable electrostatic interactions between the phosphate and the helix backbone. However, direct helix capping by the phosphorylated sidechain was not observed. The results of the calculations are consistent with experimental evidence on the stabilization of helices by phosphates and other anions.
📜 SIMILAR VOLUMES
## Abstract Local determinants of 3~10~‐helix stabilization have been ascertained from the analysis of the crystal structure data base. We have clustered all 5‐length substructures from 51 nonhomologous proteins into classes based on the conformational similarity of their backbone dihedral angles.
## Abstract The aim of the present investigation is to determine the effect of α‐helical propensity and sidechain hydrophobicity on the stability of amphipathic α‐helices. Accordingly, a series of 18‐residue amphipathic α‐helical peptides has been synthesized as a model system where all 20 amino ac