Peptide Folding: When Simulation Meets Experiment
β Scribed by Xavier Daura; Karl Gademann; Bernhard Jaun; Dieter Seebach; Wilfred F. van Gunsteren; Alan E. Mark
- Publisher
- John Wiley and Sons
- Year
- 1999
- Tongue
- English
- Weight
- 214 KB
- Volume
- 38
- Category
- Article
- ISSN
- 0044-8249
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π SIMILAR VOLUMES
A new approach to efficiently calculate solvent effect in computer simulation of macromolecular systems has been developed. Explicit solvent molecules are included in the simulation to provide a mean solvation force for the solute conformational search. Simulations of an alanine dipeptide in aqueous
Solvation effects play a profound role in the energetics of protein folding. While a continuum dielectric model of solvation may provide a sufficiently accurate estimate of the solvation effects, until now this model was too computationally expensive and unstable for folding simulations. Here we pro