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Parallel strategies for the local biological sequence alignment in a cluster of workstations

✍ Scribed by Azzedine Boukerche; Alba Cristina Magalhaes Alves de Melo; Mauricio Ayala-Rincón; Maria Emilia Machado Telles Walter

Book ID
108191920
Publisher
Elsevier Science
Year
2007
Tongue
English
Weight
663 KB
Volume
67
Category
Article
ISSN
0743-7315

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## Abstract A parallel version of the popular molecular mechanics package AMBER suitable for execution on workstation clusters has been developed. Computer‐intensive portions of molecular dynamics or free‐energy perturbation computations, such as nonbonded pair list generation or calculation of non