𝔖 Bobbio Scriptorium
✦   LIBER   ✦

Optimization of cDNA Representational Difference Analysis for the Identification of Differentially Expressed mRNAs

✍ Scribed by Kirk Pastorian; Leo Hawel III; Craig V. Byus


Publisher
Elsevier Science
Year
2000
Tongue
English
Weight
221 KB
Volume
283
Category
Article
ISSN
0003-2697

No coin nor oath required. For personal study only.

✦ Synopsis


Representational difference analysis (RDA) is a powerful and sensitive tool for identification of differentially expressed genes (M. Hubank and D. G. Schatz, 1999, Methods Enzymol. 303, 325-349; 1994, Nucleic Acids Res. 22, 5640 -5648) that will identify both up-and downregulated genes differentially expressed between two cDNA populations. This manuscript provides a thorough description of an optimized RDA method. This procedure while still based on the traditional RDA originally developed by Lisitsyn and coworkers(N.


πŸ“œ SIMILAR VOLUMES


Identification of genes with specific ex
✍ Thomas M. Gress; Christine Wallrapp; Marcus Frohme; Friederike MΓΌller-Pillasch; πŸ“‚ Article πŸ“… 1997 πŸ› John Wiley and Sons 🌐 English βš– 100 KB πŸ‘ 2 views

cDNA representational difference analysis (cDNA-RDA) is a polymerase-chain-reaction-coupled subtractive and kinetic enrichment procedure for the isolation of differentially expressed genes. In this study, the technique was used to isolate novel genes specifically expressed in pancreatic cancer. cDNA

Use of representational difference analy
✍ Michael M. Geng; Volker Ellenrieder; Christine Wallrapp; Friederike MΓΌller-Pilla πŸ“‚ Article πŸ“… 1999 πŸ› John Wiley and Sons 🌐 English βš– 258 KB πŸ‘ 2 views

It has been shown that TGFBs, their receptors, or downstream targets show genetic alterations in pancreatic cancer. This study was designed to identify transcriptional alterations induced by prolonged treatment of pancreatic cancer cell lines with TGFB. The TGFB-responsive PANC-1 cell line was treat

Significance analysis of time-series tra
✍ Bhaskar Dutta; Robert Snyder; Maria I. Klapa πŸ“‚ Article πŸ“… 2007 πŸ› John Wiley and Sons 🌐 English βš– 443 KB

## Abstract Time‐series transcriptional profiling experiments are becoming increasingly popular, in light of the abundance of information regarding a biological system's regulation that they are expected to reveal. However, identification of differentially expressed genes as a function of time and

Separation of live cells in different ph
✍ Gloria Juan; Eva Hernando; Carlos Cordon-Cardo πŸ“‚ Article πŸ“… 2002 πŸ› John Wiley and Sons 🌐 English βš– 463 KB πŸ‘ 1 views

## Abstract ## Background Homogeneity of cell populations is a basic requirement for gene expression analyses of the cell cycle, such as those based on microarrays. The most common approach to obtain specific populations is the use of synchronization methods that increase the number of cells repre