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Optimization Approaches for Solving String Selection Problems

โœ Scribed by Elisa Pappalardo, Panos M. Pardalos, Giovanni Stracquadanio (auth.)


Publisher
Springer-Verlag New York
Year
2013
Tongue
English
Leaves
57
Series
SpringerBriefs in Optimization
Edition
1
Category
Library

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โœฆ Synopsis


Optimization Approaches for Solving String Selection Problems provides an overview of optimization methods for a wide class of genomics-related problems in relation to the string selection problems. This class of problems addresses the recognition of similar characteristics or differences within biological sequences. Specifically, this book considers a large class of problems, ranging from the closest string and substring problems, to the farthest string and substring problems, to the far from most string problem. Each problem includes a detailed description, highlighting both biological and mathematical features and presents state-of-the-art approaches.

This Brief provides a quick introduction of optimization methods for string selection problems for young scientists and a detailed description of the mathematical and computational methods developed for experts in the field of optimization who want to deepen their understanding of the string selection problems. Researchers, practitioners and graduate students in the field of Computer Science, Operation Research, Mathematics, Computational Biology and Biomedicine will find this book useful. โ€‹

โœฆ Table of Contents


Front Matter....Pages i-viii
Biological Sequences....Pages 1-6
Strings: Theory, Properties and Applications....Pages 7-12
Mathematical Optimization....Pages 13-25
String Selection Problems....Pages 27-49

โœฆ Subjects


Discrete Optimization; Mathematical and Computational Biology; Discrete Mathematics in Computer Science; Math Applications in Computer Science; Computational Mathematics and Numerical Analysis


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